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A multi-site study using high-resolution HLA genotyping by next generation sequencing

C. L. Holcomb, B. Höglund, M. W. Anderson, L. A. Blake, I. Böhme, M. Egholm, D. Ferriola, C. Gabriel, S. E. Gelber, D. Goodridge, S. Hawbecker, R. Klein, M. Ladner, C. Lind, D. Monos, M. J. Pando, J.

Journal:

Tissue Antigens

Année:

2011

Langue:

english

Fichier:

PDF, 2.08 MB

english, 2011

Nutrition Knowledge, Body Satisfaction and Dietary Intake of College Students

C. Sealey-Potts, K. Hougen, C. Ferriola, D. Linehan

Journal:

Journal of the American Dietetic Association

Année:

2009

Langue:

english

Fichier:

PDF, 79 KB

english, 2009

Determining performance characteristics of an NGS-based HLA typing method for clinical applications

Duke, J. L., Lind, C., Mackiewicz, K., Ferriola, D., Papazoglou, A., Gasiewski, A., Heron, S., Huynh, A., McLaughlin, L., Rogers, M., Slavich, L., Walker, R., Monos, D. S.

Journal:

HLA

Année:

2016

Langue:

english

Fichier:

PDF, 486 KB

english, 2016

Role of TGFα and its receptor in proliferation of immortalized rat tracheal epithelial cells: Studies with tyrphostin and TGFα antisera

Patrice C. Ferriola, H. Shelton Earp, Richard Di Augustine, Paul Nettesheim

Journal:

Journal of Cellular Physiology

Année:

1991

Langue:

english

Fichier:

PDF, 1.15 MB

english, 1991

Epidermal growth factor dependence and TGFα autocrine growth regulation in primary rat tracheal epithelial cells

Patrice C. Ferriola, Alice T. Robertson, David W. Rusnak, Richard Diaugustine, Paul Nettesheim

Journal:

Journal of Cellular Physiology

Année:

1992

Langue:

english

Fichier:

PDF, 880 KB

english, 1992

Altered Growth Factor Dependence and Transforming Growth Factor Gene Expression in Transformed Rat Tracheal Epithelial Cells

Patrice C. Ferriola, Cheryl Walker, Alice T. Robertson, H. Shelton Earp, David W. Rusnak, Paul Nettesheim

Journal:

Molecular Carcinogenesis

Année:

1989

Langue:

english

Fichier:

PDF, 867 KB

english, 1989

The effect of azelastine and some other antiasthmatic and antiallergic drugs on calmodulin and protein kinase C

E. Middleton, P. Ferriola, G. Drzewiecki, R. Duane Sofia

Journal:

Inflammation Research

Année:

1989

Langue:

english

Fichier:

PDF, 508 KB

english, 1989

Sweetener Effects on Flaked Millet Breakfast Cereals

D. FERRIOLA, M. STONE

Journal:

Journal of Food Science

Année:

1998

Langue:

english

Fichier:

PDF, 90 KB

english, 1998

Expression of GPC3, an X-linked recessive overgrowth gene, is silenced in malignant mesothelioma

Murthy, Siva S, Shen, Tong, De Rienzo, Assunta, Lee, Wen-Ching, Ferriola, Patrice C, Jhanwar, Suresh C, Mossman, Brooke T, Filmus, Jorge, Testa, Joseph R

Journal:

Oncogene

Année:

2000

Langue:

english

Fichier:

PDF, 396 KB

english, 2000

Identification of a novel HLA-A23 variant allele, A23:50

D. Ferriola, S. Heron, C. Lind, D. S. Monos

Journal:

Tissue Antigens

Année:

2012

Langue:

english

Fichier:

PDF, 82 KB

english, 2012

Cellular Uptake of Phosphorothioate Oligodeoxynucleotides Is Negatively Affected by Cell Density in a Transformed Rat Tracheal Epithelial Cell Line: Implication for Antisense Approaches

T. Iwanaga, P.C. Ferriola

Journal:

Biochemical and Biophysical Research Communications

Année:

1993

Fichier:

PDF, 314 KB

1993

Alterations in the Localization of F-Actin, Fibronectin, and Thrombospondin Occur Prior to Neoplastic Transformation in Rat Tracheal Epithelial Cells

C.A. Carter, M.M. Doherty, D.W. Rusnak, P. Nettesheim, P.C. Ferriola

Journal:

Experimental Cell Research

Année:

1994

Fichier:

PDF, 1.26 MB

1994

Protein kinase C inhibition by plant flavonoids: Kinetic mechanisms and structure-activity relationships

Patrice C. Ferriola, Vivian Cody, Elliott Middleton Jr

Journal:

Biochemical Pharmacology

Année:

1989

Langue:

english

Fichier:

PDF, 1.03 MB

english, 1989

44-OR: Complete KIR haplotyping without family studies using Haplotype Specific Extraction

Cynthia Turino, Genaro Scavello, Deborah Ferriola, Mark Kunkel, Johannes Dapprich

Journal:

Human Immunology

Année:

2006

Langue:

english

Fichier:

PDF, 27 KB

english, 2006

68-OR: Haplotype linkage of HLA-B and HLA-C by tiled HSE (Haplotype-Specific Extraction)

Deborah Ferriola, Mark Kunkel, Aruna Akkapeddi, Johannes Dapprich, Nancy Murphy

Journal:

Human Immunology

Année:

2006

Langue:

english

Fichier:

PDF, 33 KB

english, 2006

14-W: Sequencing for the genomic characterization of HLA-A, B, C, DRB1 and DQB1 loci

C. Lind, D. Ferriola, K. Mackiewicz, M. D'Arcy, X. Gai, D. Goodridge, D. Sayer, J. Dapprich, D. Monos

Journal:

Human Immunology

Année:

2009

Langue:

english

Fichier:

PDF, 30 KB

english, 2009

15-OR: A Multi-Site Study Employing High Resolution HLA Genotyping by Next Generation 454 GS FLX Sequencing

Cherie L. Holcomb, Bryan Höglund, Matthew W. Anderson, Lisbeth A. Blake, Irena Böhme, Michael Egholm, Deborah Ferriola, Christian Gabriel, Damian Goodridge, Rolf Klein, Martha Ladner, Curt Lind, Dimit

Journal:

Human Immunology

Année:

2010

Langue:

english

Fichier:

PDF, 56 KB

english, 2010

Next-generation sequencing: the solution for high-resolution, unambiguous human leukocyte antigen typing

C. Lind, D. Ferriola, K. Mackiewicz, S. Heron, M. Rogers, L. Slavich, R. Walker, T. Hsiao, L. McLaughlin, M. D'Arcy, X. Gai, D. Goodridge, D. Sayer, D. Monos

Journal:

Human Immunology

Année:

2010

Langue:

english

Fichier:

PDF, 2.99 MB

english, 2010

52-OR: Targeted Enrichment for Complete Characterization of 1.4Mb of the MHC With Next Generation Sequencing

Deborah Ferriola, Katarzyna Mackiewicz, Curt Lind, Xiaowu Gai, Monica D'Arcy, Johannes Dapprich, Dimitri Monos

Journal:

Human Immunology

Année:

2010

Langue:

english

Fichier:

PDF, 61 KB

english, 2010

25-OR: Complete Genomic Sequencing of HLA-C*04:09N Using Next-Generation Sequencing Technology

Curt Lind, Deborah Ferriola, Kate Mackiewicz, David Sayer, Damian Goodridge, Dimitri Monos

Journal:

Human Immunology

Année:

2010

Langue:

english

Fichier:

PDF, 68 KB

english, 2010

158-P Complete characterization of 12 MHC genes for multiple samples by next-generation sequencing

Deborah Ferriola, Curt Lind, Steven Heron, Anh Huynh, Larissa Slavich, Ariella Sasson, Xiaowu Gai, Dimitri Monos

Journal:

Human Immunology

Année:

2011

Langue:

english

Fichier:

PDF, 44 KB

english, 2011

160-P Complete genomic characterization of 37 common and well-documented HLA class I alleles using next-generation sequencing technology

Curt Lind, Deborah Ferriola, Laura McLaughlin, Ariella Sasson, Xiaowu Gai, Dimitri Monos

Journal:

Human Immunology

Année:

2011

Langue:

english

Fichier:

PDF, 42 KB

english, 2011

Filling the gaps – The generation of full genomic sequences for 15 common and well-documented HLA class I alleles using next-generation sequencing technology

Lind, C., Ferriola, D., Mackiewicz, K., Papazoglou, A., Sasson, A., Monos, D.

Journal:

Human Immunology

Année:

2013

Langue:

english

Fichier:

PDF, 520 KB

english, 2013

435 Some biochemical properties of azelastine

SOFIA, D, MIDDLETONJR, E, FERRIOLA, P, DRZEWIECKI, G

Journal:

Journal of Allergy and Clinical Immunology

Année:

1988

Langue:

english

Fichier:

PDF, 135 KB

english, 1988

Demographic and clinical characteristics of nonconstipated female IBS patients in the united states

Nicholas J. Talley, Steve Kong, Patrice C. Ferriola, Allen W. Mangel

Journal:

Gastroenterology

Année:

2000

Langue:

english

Fichier:

PDF, 172 KB

english, 2000

Characterization of a new HLA-C04 allele, C 04:112

Ferriola, D., Heron, S., Lind, C., Monos, D. S.

Journal:

Tissue Antigens

Année:

2013

Langue:

english

Fichier:

PDF, 94 KB

english, 2013

Expression and organization of fibronectin and thrombospondin by pleural mesothelial cells and asbestos-induced mesothelioma cells

Ferriola, P.C., Stewart, Wendy

Journal:

Lung Cancer

Année:

1996

Langue:

english

Fichier:

PDF, 149 KB

english, 1996

125-P

Lind, Curt, Duke, Jamie, Ferriola, Deborah, Mackiewicz, Katarzyna, Papazoglou, Anna, Heron, Steven, Monos, Dimitri

Journal:

Human Immunology

Année:

2013

Langue:

english

Fichier:

PDF, 28 KB

english, 2013

OR04

Lind, Curt, Ferriola, Deborah, Huynh, Anh, Duke, Jamie, Papazoglou, Anna, Askar, Medhat, Berces, Attila, Christiansen, Mette, Dong, Wei, Gandhi, Manish, Hague, Tim, Horvath, Gyorgy, Hsu, Susan, Johnso

Journal:

Human Immunology

Année:

2014

Langue:

english

Fichier:

PDF, 35 KB

english, 2014

P082

Askar, Medhat, Thomas, Dawn, Ferriola, Deborah, Duke, Jamie, Lind, Curt, Monos, Dimitri

Journal:

Human Immunology

Année:

2014

Langue:

english

Fichier:

PDF, 35 KB

english, 2014

SNP-specific extraction of haplotype-resolved targeted genomic regions

Dapprich, J., Ferriola, D., Magira, E. E., Kunkel, M., Monos, D.

Journal:

Nucleic Acids Research

Année:

2008

Langue:

english

Fichier:

PDF, 4.11 MB

english, 2008

Identification of a novel HLA-DQB102 variant allele, DQB1 02:01:06

Heron, S., Ferriola, D., Lind, C., Monos, D. S.

Journal:

Tissue Antigens

Année:

2013

Langue:

english

Fichier:

PDF, 466 KB

english, 2013

Identification and characterization of a novel HLA-B hybrid allele, B*08:132 with Next Generation Sequencing

Papazoglou, A., Gasiewski, A., Huynh, A., Duke, J., Ferriola, D., Rogers, M., Lind, C., Monos, D. S.

Journal:

Tissue Antigens

Année:

2014

Langue:

english

Fichier:

PDF, 156 KB

english, 2014

Microtubule Actin Crosslinking Factor 1 Regulates the Balbiani Body and Animal-Vegetal Polarity of the Zebrafish Oocyte

Gupta, Tripti, Marlow, Florence L., Ferriola, Deborah, Mackiewicz, Katarzyna, Dapprich, Johannes, Monos, Dimitri, Mullins, Mary C., Barsh, Gregory S.

Journal:

PLoS Genetics

Année:

2010

Langue:

english

Fichier:

PDF, 5.15 MB

english, 2010

Phenotype and differentiation potential of a novel rat tracheal epithelial cell line.

Doherty, M M, Liu, J, Randell, S H, Carter, C A, Davis, C W, Nettesheim, P, Ferriola, P C

Journal:

American Journal of Respiratory Cell and Molecular Biology

Année:

1995

Langue:

english

Fichier:

PDF, 1.26 MB

english, 1995

Mucin production by SPOC1 cells--an immortalized rat tracheal epithelial cell line.

Randell, S H, Liu, J Y, Ferriola, P C, Kaartinen, L, Doherty, M M, Davis, C W, Nettesheim, P

Journal:

American Journal of Respiratory Cell and Molecular Biology

Année:

1996

Langue:

english

Fichier:

PDF, 1.07 MB

english, 1996

HLA typing by NGS in the clinical lab: our one and a half years experience

Duke, Jamie, Ferriola, Deborah, Huynh, Anh, Heron, Steve, Gasiewski, Allison, Huang, Yanping, Lind, Curt, McLaughlin, Laura, Mehler, Hilary, Papazoglou, Anna, Rogers, Marianne, Slavich, Larissa, Walke

Journal:

Human Immunology

Année:

2015

Langue:

english

Fichier:

PDF, 39 KB

english, 2015

Enhanced characterization of 109 genomic dna reference material for 6 HLA loci by next-generation sequencing (NGS)

Ferriola, Deborah, Duke, Jamie, Huynh, Anh, Gasiewski, Alison, Rogers, Marianne, Slavich, Larissa, McLaughlin, Laura, Jennings, Larry, Bettinotti, Maria, Kalman, Lisa, Monos, Dimitri

Journal:

Human Immunology

Année:

2015

Langue:

english

Fichier:

PDF, 251 KB

english, 2015

Generation of high confidence HLA genotyping and consensus sequences for class I HLA loci using the NGS-based Omixon Holotype HLA typing system and the Illumina Miseq platform

Clark, Peter M., Duke, Jamie, Ferriola, Deborah, Papazoglou, Anna, Hassan, Aniqa, Monos, Dimitri

Journal:

Human Immunology

Année:

2015

Langue:

english

Fichier:

PDF, 40 KB

english, 2015

Abnormalities in Growth Regulation of Transformed Rat Tracheal Epithelial Cells

Ferriola, P.C., Steigerwalt, R., Robertson, AT., Nettesheim, P.

Journal:

Pathobiology

Année:

1990

Fichier:

PDF, 1.55 MB

1990

The Role of Growth Factors in the Regulation of Proliferation of Tracheobronchial Epithelium

Nettesheim, Paul, Ferriola, Patrice, Steigerwalt, Ronald, Robertson, Alice, Rundhaug, Joyce

Journal:

CHEST Journal

Année:

1992

Langue:

english

Fichier:

PDF, 785 KB

english, 1992

Automation of the amplification and library preparation steps for HLA typing using the NGS-based Holotype HLA kit and the Hamilton STARlet system

Huang, Yanping, Galbraith, Matt, Huynh, Anh B., Ferriola, Deborah, Monos, Dimitri

Journal:

Human Immunology

Année:

2015

Langue:

english

Fichier:

PDF, 36 KB

english, 2015

Deriving HLA genotyping from whole genome sequencing data using Omixon HLA twin(tm) in G3’s global clinical study

Juhos, Szilveszter, Vágó, Tünde, Ferriola, Deborah, Duke, Jamie, Vörös, Szilárd, Brown, Bradley O., Marvasty, Idean, Hague, Tim, Monos, Dimitri

Journal:

Human Immunology

Année:

2015

Langue:

english

Fichier:

PDF, 42 KB

english, 2015

Towards allele-level human leucocyte antigens genotyping - assessing two next-generation sequencing platforms: Ion Torrent Personal Genome Machine and Illumina MiSeq

Duke, J. L., Lind, C., Mackiewicz, K., Ferriola, D., Papazoglou, A., Derbeneva, O., Wallace, D., Monos, D. S.

Journal:

International Journal of Immunogenetics

Année:

2015

Langue:

english

Fichier:

PDF, 809 KB

english, 2015

OR53 Three case reports: NGS-based high resolution HLA typing permits better assessment of donor-recipient compatibility in solid organ transplant

Huang, Yanping, Gasiewski, Allison, Mehler, Hilary, Heron, Steven, Ferriola, Deborah, Monos, Dimitri

Journal:

Human Immunology

Année:

2016

Langue:

english

Fichier:

PDF, 33 KB

english, 2016

The next generation of target capture technologies - large DNA fragment enrichment and sequencing determines regional genomic variation of high complexity

Dapprich, Johannes, Ferriola, Deborah, Mackiewicz, Kate, Clark, Peter M., Rappaport, Eric, D’Arcy, Monica, Sasson, Ariella, Gai, Xiaowu, Schug, Jonathan, Kaestner, Klaus H., Monos, Dimitri

Journal:

BMC Genomics

Année:

2016

Langue:

english

Fichier:

PDF, 1.68 MB

english, 2016

Targeted Next-Generation Sequencing for Human Leukocyte Antigen Typing in a Clinical Laboratory: Metrics of Relevance and Considerations for Its Successful Implementation

Gandhi, Manish J., Ferriola, Deborah, Huang, Yanping, Duke, Jamie L., Monos, Dimitri

Journal:

Archives of Pathology & Laboratory Medicine

Année:

2017

Langue:

english

Fichier:

PDF, 869 KB

english, 2017

Characterization and Comparative Analysis of Ancient Earthen Plasters from the American Southwest

Bass, Angelyn, Porter, Douglas, Spilde, Mike, Guebard, Matthew, Shaum, Katherine, Ferriola, Nicholas

Journal:

MRS Advances

Année:

2017

Langue:

english

Fichier:

PDF, 62.25 MB

english, 2017

P050 Rapid, high resolution HLA genotyping using nanopore sequencing

Clark, Peter M., Ferriola, Deborah, Monos, Dimitri S.

Journal:

Human Immunology

Année:

2017

Langue:

english

Fichier:

PDF, 30 KB

english, 2017

Characterization of 108 Genomic DNA Reference Materials for 11 Human Leukocyte Antigen (HLA) Loci: A GeT-RM Collaborative Project

Bettinotti, Maria P., Ferriola, Deborah, Duke, Jamie L., Mosbruger, Timothy L., Tairis, Nikolaos, Jennings, Lawrence, Kalman, Lisa V., Monos, Dimitri

Journal:

The Journal of Molecular Diagnostics

Année:

2018

Langue:

english

Fichier:

PDF, 378 KB

english, 2018